BSgenome.Mmusculus.UCSC.mm9

This is the released version of BSgenome.Mmusculus.UCSC.mm9; for the devel version, see BSgenome.Mmusculus.UCSC.mm9.

Full genome sequences for Mus musculus (UCSC version mm9)

Bioconductor version: Release (3.20)

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm9, Jul. 2007) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm9")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Mmusculus.UCSC.mm9")

For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual	PDF

biocViews	AnnotationData, BSgenome, Genetics, Mus_musculus
Version	1.4.0
License	Artistic-2.0
Depends	BSgenome(>= 1.33.5)
Imports	BSgenome
System Requirements
URL

Suggests	TxDb.Mmusculus.UCSC.mm9.knownGene
Linking To
Enhances
Depends On Me	BSgenome.Mmusculus.UCSC.mm9.masked
Imports Me	musicatk, SPLINTER, BSgenome.Mmusculus.UCSC.mm9.masked
Suggests Me	CAGEr, chipseq, circRNAprofiler, compEpiTools, EpiCompare, GRaNIE, HiCDCPlus, MEDME, methrix, MMDiff2, CAGEWorkflow
Links To Me

Follow Installation instructions to use this package in your R session.

Source Package	BSgenome.Mmusculus.UCSC.mm9_1.4.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm9/
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