BSgenomeForge {BSgenome} | R Documentation |
The BSgenomeForge functions are intended to be used for making "Biostring-based genome data packages" (aka "BSgenome packages") like the BSgenome.Hsapiens.UCSC.hg18 package. They are not intended to be used by "regular" users of these packages.
There are currently two BSgenomeForge functions: forgeSeqFiles
and forgeMaskFiles
.
forgeSeqFiles(srcdir, destdir, names, prefix="", suffix="", comments=NULL, single.seq=TRUE) forgeMaskFiles(srcdir, destdir, seqnames, seqdir, masks_per_seq, agp_or_gap, prefix=NA, suffix=NA)
srcdir |
[TODO: Document me] |
destdir |
[TODO: Document me] |
names |
[TODO: Document me] |
prefix |
[TODO: Document me] |
suffix |
[TODO: Document me] |
comments |
[TODO: Document me] |
single.seq |
[TODO: Document me] |
seqnames |
[TODO: Document me] |
seqdir |
[TODO: Document me] |
masks_per_seq |
[TODO: Document me] |
agp_or_gap |
[TODO: Document me] |
H. Pages