Infrastructure for Biostrings-based genome data packages


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Documentation for package ‘BSgenome’ version 1.8.4

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$,BSgenome-method The BSgenome class
available.genomes available.genomes
available.SNPs injectSNPs
BSgenome The BSgenome class
BSgenome-class The BSgenome class
BSgenomeForge The BSgenomeForge functions
class:BSgenome The BSgenome class
forgeMaskFiles The BSgenomeForge functions
forgeSeqFiles The BSgenomeForge functions
getSeq getSeq
injectSNPs injectSNPs
length,BSgenome-method The BSgenome class
mseqnames The BSgenome class
mseqnames,BSgenome-method The BSgenome class
names,BSgenome-method The BSgenome class
organism The BSgenome class
organism,BSgenome-method The BSgenome class
provider The BSgenome class
provider,BSgenome-method The BSgenome class
providerVersion The BSgenome class
providerVersion,BSgenome-method The BSgenome class
releaseDate The BSgenome class
releaseDate,BSgenome-method The BSgenome class
releaseName The BSgenome class
releaseName,BSgenome-method The BSgenome class
seqnames The BSgenome class
seqnames,BSgenome-method The BSgenome class
show,BSgenome-method The BSgenome class
SNPlocs_pkgname The BSgenome class
SNPlocs_pkgname,BSgenome-method The BSgenome class
sourceUrl The BSgenome class
sourceUrl,BSgenome-method The BSgenome class
species The BSgenome class
species,BSgenome-method The BSgenome class
unload The BSgenome class
unload,BSgenome-method The BSgenome class
[[,BSgenome-method The BSgenome class
[[<-,BSgenome-method The BSgenome class