SBML import {rsbml}R Documentation

Read in an SBML file (start here)

Description

Read an SBML file into R.

Usage

rsbml_read(filename, text, check = TRUE, validate = FALSE)

Arguments

filename the name of the SBML file to parse
text a string of SBML text to parse (instead of file)
check whether to report problems encountered during parsing
validate whether to perform XML schema validation

Value

a SBMLDocument

Author(s)

Michael Lawrence

Examples

  # Read an SBML file
  file <- system.file("sbml", "GlycolysisLayout.xml", package = "rsbml")
  doc <- rsbml_read(file)
  
  # Read an SBML string
  string <- paste(readLines(file),collapse="\n")
  doc <- rsbml_read(text = string)

[Package rsbml version 1.4.0 Index]