SBMLDocument-class {rsbml} | R Documentation |
Low-level libsbml document structure.
A virtual Class: No objects may be created from it.
Class "oldClass"
, directly.
signature(object = "SBMLDocument")
:
semantically validates the document. Emits warnings describing the problems.signature(doc = "SBMLDocument")
: Constructs an S4
object model from a libsbml document. signature(doc = "SBMLDocument")
: Converts a
libsbml document to a graph
. signature(object = "SBMLDocument")
:
reports problems encountered during parsing and/or validation.signature(object = "SBMLDocument")
: writes this
document to a file as SBML. signature(object = "SBMLDocument")
: converts this
document to a string as SBML. Michael Lawrence
# Read a document doc <- rsbml_read(system.file("sbml", "GlycolysisLayout.xml", package = "rsbml")) # Check the document rsbml_check(doc) # Convert it to an S4 DOM dom <- rsbml_dom(doc) # Or a graph graph <- rsbml_graph(doc) # Write it out to a file ## Not run: rsbml_write(doc, "my.xml") # Or convert it to a string of XML rsbml_xml(doc)