read.gatingML {flowUtils} | R Documentation |
Parsing Gating-ML into a structured filter.
read.gatingML(file,...)
file |
xml file describing a gate |
... |
additional arguments that are passed to the methods |
The Gating-ML specification has been developed as an interchange format for the description of gates relevant to a flow cytometry experiment. Presently, we can read version 1.3 of the specification, which was the most recent at the time of this writing. When used in conjunction with Compensation-ML and Transformation-ML, this specification can
A filterSet-class
object containing all of the filters defined in
the specified file.
Structured filter of class as defined in the flowCore
package.
B. Ellis
~put references to the literature/web site here ~
EGate <-read.gatingML(system.file("xml", "EllipsoidGates.xml", package="flowUtils"))