xmapGene {exonmap}R Documentation

Linking to X:MAP browser

Description

Displays gene/transcript/exon/probeset in a web browser window using X:MAP browser.

Usage

xmapGene(x)
xmapTranscript(x)
xmapExon(x)
xmapProbeset(x)

Arguments

x Database identifier

Details

The function attempts to open a new window using the default web browser, pointing at the X:MAP website for the item of interest. In cases when the identifier is ambiguous (i.e., it matches multiple locations in the genome) or is incorrect, a warning message is issued.

The function xmapBridge can also display expression data in the X:MAP browser. See the manpage for more details.

Value

Author(s)

Michal Okoniewski

References

http://bioinformatics.picr.man.ac.uk/

See Also

xmapBridge

Examples

 
  ## Not run: 
    xmapGene("ENSG00000146556")
  
## End(Not run)

[Package exonmap version 1.4.3 Index]