convertOldCellHTS {cellHTS2} | R Documentation |
Convert an old S3 class cellHTS
object obtained using cellHTS
package
to new S4 class cellHTS
object(s).
convertOldCellHTS(oldObject)
oldObject |
a S3 class cellHTS object obtained using the package cellHTS . |
This function converts an old S3 cellHTS
class object called oldObjt
into S4 class cellHTS
object(s).
The function returns a list containing at least one cellHTS
objects named "raw" which corresponds
to a unnormalized cellHTS
object (i.e. comprising the raw data stored in oldObject
).
Depending on the state of oldObject
(normalized and scored), the other components of this list can be:
"normalized"
: a S4 class cellHTS
object containing normalized data, and
"scored"
: a S4 class cellHTS
object containing scored data.
Ligia P. Bras ligia@ebi.ac.uk
Boutros, M., Bras, L.P. and Huber, W. (2006) Analysis of cell-based RNAi screens, Genome Biology 7, R66.
data(oldKcViabSmall) out <- convertOldCellHTS(oldKcViabSmall) x <- out[["raw"]] x