attributeSummary |
Gives a summary of the attributes groups and categories |
exportFASTA |
Exports getSequence results to FASTA format |
filterOptions |
Displays the filter options |
filterSummary |
Gives a summary of the filters groups and categories |
filterType |
Displays the filter type |
getAffyArrays |
Displays affy identifiers of Affymetrix chips supported by the Ensembl package |
getBM |
Retrieves information from the BioMart database |
getFeature |
Retrieves identifiers starting from a gene symbol, chromosomal position or GO identifier |
getGene |
Retrieves gene annotation information given a vector of identifiers |
getGO |
Retrieves GO information |
getHomolog |
Get homologs |
getLDS |
Retrieves information from two linked datasets |
getSequence |
Retrieves sequences |
getSNP |
Retrieves SNP's between a given chromosome start and end position |
listAttributes |
lists the attributes available in the selected dataset |
listDatasets |
lists the datasets available in the selected BioMart database |
listFilters |
lists the filters available in the selected dataset |
listMarts |
lists the avilable BioMart databases |
Mart-class |
Class Mart |
martDisconnect |
Disconnects from BioMarts |
parseAttributes |
parse attributes |
parseFilters |
parse filters |
show,Mart-method |
Class Mart |
useDataset |
Select a dataset to use and updates Mart object |
useMart |
Connects to the selected BioMart database and dataset |