GGfitter-class {GGtools}R Documentation

Class "GGfitter" wrapper for special functions to do whole genome screens

Description

wraps functions that call C code

Objects from the Class

Objects can be created by calls of the form new("GGfitter", ...). They can be supplied as arguments to snpScreen.

Slots

name:
Object of class "character" giving a name
func:
Object of class "function" the actual function that calls C to perform the screen

Methods

snpScreen
signature(racExSet = "racExSet", snpMeta = "snpMeta", gene = "genesym", formTemplate = "formula", fitter = "GGfitter", gran = "ANY"): primary usage of this class

Note

Previously, deparse(substitute(fn)) was used to get information on the fitter. This is not reliable, and all fitting functions used in this context will have to be reflective instances of this class.

Author(s)

VJ Carey <stvjc@channing.harvard.edu>

Examples

showClass("GGfitter")

[Package GGtools version 1.6.1 Index]