costMatrix |
Segmentation cost matrix |
findSegments |
Fit a piecewise constant curve to a sequence of numbers |
getAttributeField |
Extract the value of a certain field out of a character vector such as in the "attributes" column of a GFF table. |
isWithinInterval |
Test whether a vector of numbers is within a vector of intervals |
otherStrand |
Return the name of the opposite strand |
plotAlongChrom |
Plot microarray data and annotation features along a chromosomal region |
plotAlongChrom2 |
Plot the results of segmentation along a chromosomal region |
posMin |
Find the smallest positive number in a vector |
qualityReport |
Assess quality of normalized poly-A-RNA samples |
scoreSegments |
Score segments |