correctinternal-methods {mscalib}R Documentation

Corrects the masses using internal calibration

Description

Exectues the functions getintcalib-methods and \code{applycalib}

Arguments

object see above
calib see above
error size of window for search of matching calibration peaks
ppm If the error above is provided in relative (parts per million) or absolute arbitrary (e.g. Da) units
uniq if ambigous 'crossing' matches should be resolved, default FALSE
weight default - FALSE. Do not use weighted linear regression
interfix If TRUE fix the slope if ppm=FALSE, fix intercept otherwise.

Methods

object = "Massvector", calib = "Massvector"
returns Massvector-class
object = "Massvectorlist", calib = "Massvector"
returns Massvectorlist-class

See Also

getintcalib-methods , Calibstat-class ,Calibintstat-class ,Caliblist-class , Calibintlist-class

Examples


library(msbase)
data(pldata)
data(cal2)
pldata <- correctinternal(pldata,cal2,error=400,ppm=TRUE)


[Package mscalib version 1.0.1 Index]