Calibintstat-class {mscalib}R Documentation

Class "Calibintstat" : Internal calibration

Description

Calibration coefficients obtained by internal calibration.

Objects from the Class

Objects can be created by the call of the function getintcalib-methods.

Slots

nrmatch:
Object of class "numeric" : number of peaks matched to theoretical masses
ppm:
Object of class "logical": the mass measurement error is either described in parts per million (ppm=TRUE) or in arbitrary units (FALSE)
error:
Object of class "numeric": Size of the search window.
lmmod:
Object of class "lmNULL": either object of class lm or NULL
info:
Object of class "character": identifier
tcoor:
Object of class "numeric": target coordinates
Coeff.Intercept:
Object of class "numeric" intercept coefficient
Coeff.Slope:
Object of class "numeric" slope coefficient
lengthmv:
Object of class "numeric" length of Massvector
quality:
Object of class "numeric": calibration model quality index (developmental)

Extends

Class "Calibstat", directly.

Methods

applycalib
signature(obx = "Massvector", oby = "Calibintstat"): applys Calibintstat model to Massvector
applycalib
signature(obx = "Massvectorlist", oby = "Calibintstat"): ...
applycalib
signature(obx = "Calibintstat", oby = "Massvector"): ...
applycalib
signature(obx = "Calibintstat", oby = "Massvectorlist"): ...
coerce<-
signature(from = "Calibintstat", to = "list"): ...
coerce
signature(from = "Calibintstat", to = "numeric"): ...
coerce
signature(from = "Calibintstat", to = "list"): ...
plot
signature(x = "Calibintstat", y = "missing"): ...
show
signature(object = "Calibintstat"): ...

Note

Author(s)

References

See Also

Calibstat-class,Calibprestat-class

Examples

##---- Should be DIRECTLY executable !! ----

[Package mscalib version 1.0.1 Index]