contrastTest |
'contrastTest' performs simultaneous tests of linear contrasts on the parameters estimates from a linear model. |
estrogen |
Microarray Data from an Experiment on Breast Cancer Cells |
findFC |
A function to find the fold change between two experimental conditions in a factorial experiment based on the linear model parameter estimates. |
findFClog |
A function to find the fold change between two experimental conditions in a factorial experiment based on the linear model parameter estimates for the data that has been log-transformed. |
kRepsOverA |
A filter function for at least k sets of replicates in a factorial experiment to have mean larger than A. |
madOutPair |
A function to determine if the pair with the largest difference between replicates is the result of a single outlier. |
outlierPair |
A method for detecting single outliers in experimental designs with only two replicates per treatment condition. |
par2lambda |
A function to construct the appropriate lambda matrix for a test of contrast of linear model parameters. |