qwrite {webbioc}R Documentation

Save q-value Results to a File

Description

Saves the object created by the qvalue function to a plain text file.

Usage

qwrite(qobj, filename="my-qvalue-results.txt

Arguments

qobj a q-value object returned by the qvalue function
filename the name of the file where the results are written

Value

A file sent to "filename" with the following:

First row the function call used to produce the estimates
Second row the estimate of the proportion of false positives, pi0
Third row and below the p-values (1st column) and the estimated q-values (2nd column)

Author(s)

John D. Storey http://faculty.washington.edu/~jstorey/

References

Storey JD. (2002) A direct approach to false discovery rates. Journal of the Royal Statistical Society, Series B, 64: 479-498.


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