visHexBarplot {supraHex} | R Documentation |
visHexBarplot
is supposed to visualise codebook matrix using
barplot for all hexagons or a specific one
visHexBarplot(sObj, which.hexagon = NULL, which.hexagon.highlight = NULL, height = 7, margin = rep(0.1, 4), colormap = c("customized", "bwr", "jet", "gbr", "wyr", "br", "yr", "rainbow", "wb"), customized.color = "red", zeropattern.color = "gray", gp = grid::gpar(cex = 0.7, font = 1, col = "black"), bar.text.cex = 0.8, bar.text.srt = 90, newpage = TRUE)
sObj |
an object of class "sMap" or "sTopol" or "sInit" |
which.hexagon |
the integer specifying which hexagon to display. If NULL, all hexagons will be visualised |
which.hexagon.highlight |
an integer vector specifying which hexagons are labelled. If NULL, all hexagons will be labelled |
height |
a numeric value specifying the height of device |
margin |
margins as units of length 4 or 1 |
colormap |
short name for the predifined colormap, and "customized" for custom input (see the next 'customized.color'). The predifined colormap can be one of "jet" (jet colormap), "bwr" (blue-white-red colormap), "gbr" (green-black-red colormap), "wyr" (white-yellow-red colormap), "br" (black-red colormap), "yr" (yellow-red colormap), "wb" (white-black colormap), and "rainbow" (rainbow colormap, that is, red-yellow-green-cyan-blue-magenta). Alternatively, any hyphen-separated HTML color names, e.g. "blue-black-yellow", "royalblue-white-sandybrown", "darkgreen-white-darkviolet". A list of standard color names can be found in http://html-color-codes.info/color-names |
customized.color |
the customized color for pattern visualisation |
zeropattern.color |
the color for zero horizental line |
gp |
an object of class "gpar". It is the output from a call to the function "gpar" (i.e., a list of graphical parameter settings) |
bar.text.cex |
a numerical value giving the amount by which bar text should be magnified relative to the default (i.e., 1) |
bar.text.srt |
a numerical value giving the angle by which bar text should be orientated |
newpage |
logical to indicate whether to open a new page. By default, it sets to true for opening a new page |
invisible
none
# 1) generate data with an iid matrix of 1000 x 9 data <- cbind(matrix(rnorm(1000*3,mean=0,sd=1), nrow=1000, ncol=3), matrix(rnorm(1000*3,mean=0.5,sd=1), nrow=1000, ncol=3), matrix(rnorm(1000*3,mean=-0.5,sd=1), nrow=1000, ncol=3)) colnames(data) <- c("S1","S1","S1","S2","S2","S2","S3","S3","S3") # 2) sMap resulted from using by default setup sMap <- sPipeline(data=data) # 3) plot codebook patterns using different types # 3a) for all hexagons visHexBarplot(sMap) # 3b) only for the first hexagon visHexBarplot(sMap, which.hexagon=1)