rcpp_naive {srnadiff} | R Documentation |
Compute naive method.
rcpp_naive(lengths, values, chromosomeSizes, depth, distance, size)
lengths |
the sizes of the RLEs (one list per chromosome) |
values |
the values of the RLEs (one list per chromosome) |
chromosomeSizes |
the sizes of the chromosomes |
depth |
minimum number of reads per position |
distance |
threshold to merge consecutive regions |
size |
minimum region size |
the unique counts