setTransitionProbabilities {srnadiff}R Documentation

Set transition probabilities (for the HMM step).

Description

Set transition probabilities (for the HMM step).

Usage

setTransitionProbabilities(object, noDiffToDiff, diffToNoDiff)

## S4 method for signature 'sRNADiff,numeric,numeric'
setTransitionProbabilities(object,
  noDiffToDiff, diffToNoDiff)

Arguments

object

An srnadiff object.

noDiffToDiff

probability to change from the "not-differentially expressed" state to the "differentially expressed" state

diffToNoDiff

probability to change from the "differentially expressed" state to the "not-differentially expressed" state

Value

The same object

Examples

exp <- sRNADiffExample()
exp <- setTransitionProbabilities(exp, 0.001, 0.000001)


[Package srnadiff version 1.0.0 Index]