getCoverageFromRS {rnaSeqMap} | R Documentation |
Calculates the coverage function for the reads encapsulated in the SeqReads object.
getCoverageFromRS(rs, exps)
rs |
SeqReads object to modify |
exps |
Vector of numbers of experimental samples in xXMAP |
NucleotideDistr object with coverage matrix in assayData slot and type "COV".
Michal Okoniewski, Anna Lesniewska
# if (xmapConnected()) # { # rs <- newSeqReads(1,1,20000,1) # rs <- addExperimentsToReadset(rs,1:6) # nd.cov <- getCoverageFromRS(rs,1:3) # }