coverageRef {recoup} | R Documentation |
This function fills the coverage
field in the
main input
argument in recoup
function.
coverageRef( input, mainRanges, strandedParams = list(strand=NULL, ignoreStrand=TRUE), rc = NULL )
input |
an input list as in |
mainRanges |
the |
strandedParams |
see the |
rc |
fraction (0-1) of cores to use in a multicore
system. It defaults to |
Same as input with the ranges
fields filled.
Panagiotis Moulos
# Load some data data("recoup_test_data",package="recoup") # Calculate coverages testGenomeRanges <- makeGRangesFromDataFrame(df=test.genome, keep.extra.columns=TRUE) test.input <- coverageRef( test.input, mainRanges=testGenomeRanges )