labelRatio {proteoQC}R Documentation

Calculate the labeling efficiency of isobaric labeling data

Description

Calculate the labeling efficiency of isobaric labeling data

Usage

labelRatio(ms = NULL, reporter = 1, plot = TRUE)

Arguments

ms

MS/MS file.

reporter

Isobaric tag class, 1=iTRAQ-4plex, 2=iTRAQ-8plex, 3=TMT-6plex. 4=TMT-10plex.

plot

Logical value

Value

A vector object

Author(s)

Bo Wen wenbo@genomics.cn

Examples

mgf.zip <- system.file("extdata/mgf.zip", package = "proteoQC")
unzip(mgf.zip)
a <- labelRatio("test.mgf",reporter=2)

[Package proteoQC version 1.16.0 Index]