plot_primer_cvg,Primers,Templates-method {openPrimeR}R Documentation

Plot Individual Primer Coverage.

Description

Shows which templates are covered by individual primers.

Usage

## S4 method for signature 'Primers,Templates'
plot_primer_cvg(primers, templates,
  per.mismatch = FALSE, groups = NULL)

Arguments

per.mismatch

Whether to stratify by allowed mismatches.

p.df

Primer data frame.

template.df

Template data frame.

excluded.seqs

Identifiers of templates that should not be considered.

per.mismatch

Whether the coverage should be broken down for individual settings of allowed mismatches.

Value

A bar plot showing the coverage of individual primers.


[Package openPrimeR version 1.2.0 Index]