generateDNAString {motifcounter} | R Documentation |
This function generates a random DNAString of a given length by sampling from the background model.
generateDNAString(len, bg)
len |
Integer length of the sequence |
bg |
A Background object |
A DNAString object
# Load sequences seqfile = system.file("extdata", "seq.fasta", package = "motifcounter") seqs = Biostrings::readDNAStringSet(seqfile) # Load background bg = readBackground(seqs, 1) # Generate a 1 kb random sequence motifcounter:::generateDNAString(1000, bg)