SummarizedData {iteremoval} | R Documentation |
RangedSummarizedExperiment object contains the probability
data of the control and positive samples. It is the integration of
SWRG0
and SWRG1
. colData
in SummarizedData
contains a column 'Group' indicating normal(0) from malignant(1). In assay,
column represents samples,
row represents genome ranges related to a disease.
SummarizedData
RangedSummarizedExperiment.
We identified 299 genomic regions related to the methylation status of a disease. Then, we sequenced the cfDNA of 44 subjects. 22 were malignant, while others were normal. We built a statistical model to compute the probability of the disease for each region and subject, and this dataframe contains the probabilities of 299 regions and 44 samples.