summarizeFlow {flowTime} | R Documentation |
Gates a sample to all yeast, then singlet, then doublets. Also calculates singlet to doublet ratio. Returns a list of data frames, e.g. output$singlets, output$doublets, etc.
summarizeFlow(flowset, channel = "FL1.A", gated = FALSE, ploidy = FALSE, moments = FALSE, only = FALSE)
flowset |
the |
channel |
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gated |
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ploidy |
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moments |
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only |
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data frame
containing the specified summary statistics of
the specified cell populations for each frame
plate1 <- read.flowSet(path = system.file("extdata", "ss_example", package = "flowTime"), alter.names = TRUE) summarizeFlow(plate1, channel = "FL1.A", gated = TRUE, ploidy = "diploid", moments = FALSE, only = "yeast")