degreesOfFreedom-methods {cpvSNP} | R Documentation |
degreesOfFreedom
~~This function returns the degrees of freedom used to calculate p-values from the corresponding GeneSet
or a list of degrees of freedom for a GeneSetCollection
.
degreesOfFreedom(object)
object |
An object of type |
Defined methods include:
signature(object = "GeneSetResult")
Returns the degrees of freedom for a GeneSetResult
object
signature(object = "VEGASResult")
Returns the degrees of freedom for a VEGASResult
object
signature(object = "GLOSSIResult")
Returns the degrees of freedom for a GLOSSIResult
object
signature(object = "GeneSetResultCollection")
Returns a list of degrees of freedom for a GeneSetResultCollection
objects (1 for each set)
signature(object = "VEGASResultCollection")
Returns a list of degrees of freedom for a VEGASResultCollection
objects (1 for each set)
signature(object = "GLOSSIResultCollection")
Returns a list of degrees of freedom for a GLOSSIResultCollection
objects (1 for each set)
Returns an integer or a list of integers indicating the degrees of freedom in the corresponding object.
Caitlin McHugh
VEGASResult
-class, pValue
## Not run: degreesOfFreedom( vegas(geneSet, assoc_table, ldMatrix) ) ## End(Not run)