modtest_ic {biotmle} | R Documentation |
Performs variance shrinkage via the empirical Bayes procedure of LIMMA on the observed data after a transformation moving the data to influence curve space, based on the average treatment effect parameter.
modtest_ic(biotmle, adjust = "BH")
biotmle |
|
adjust |
the multiple testing correction to be applied to p-values that are generated from the moderated tests. The recommended (and default) method is that of Benjamini and Hochberg. See topTable for a list of appropriate methods. |
biotmle
object containing output from limma::lmFit
and
limma::topTable
library(biotmleData) library(SummarizedExperiment) data(biomarkertmleOut) limmaTMLEout <- modtest_ic(biotmle = biomarkerTMLEout)