rnaseq_ic {biotmle} | R Documentation |
This function prepares next-generation sequencing data (counts) for use with
the biomarker TMLE procedure by invoking the voom transform of limma
.
rnaseq_ic(biotmle, weights = TRUE, ...)
biotmle |
(bioTMLE) - subclass of |
weights |
(logical) - whether to return quality weights of samples in the output object. |
... |
- other arguments to be passed to functions |
EList
object containing voom-transformed "expression" measures
of count data (actually, the mean-variance trend) in the "E" slot, to
be passed into the biomarker TMLE procedure.