tpp2dTRReferenceObject {TPP}R Documentation

TPP-TR reference object

Description

Definition of a TPP-TR reference object

Usage

tpp2dTRReferenceObject(tppRefData = NULL, tppRefPath = NULL,
  fcStr = "norm_rel_fc_", qualColName = "qupm")

Arguments

tppRefData

TPP-TR reference object that can be directly passed to the function

tppRefPath

character string containing a system path to a RData file containing an TPP-TR reference object

fcStr

character string indicating which columns contain the fold changes

qualColName

character string indicating which column contain protein identification quality measures

Value

A TPP-TR reference object

Examples

trRef <- system.file("example_data/2D_example_data/referenceNormData.RData", package="TPP")
tpp2dTRReferenceObject(tppRefPath=trRef)


[Package TPP version 3.8.5 Index]