QuantNormalizeElements {Sconify}R Documentation

Takes a list of tibbles as input, and performs per-column quantile normalization, then outputs the quantile normalized list

Description

This function performs per-marker quantile normalization on multiple data tibbles. The normalization occurrs marker by marker. The user assumes that the markers are distributed equally across tibbles, as quantile normalization forces these marker distributions to be the same per file

Usage

QuantNormalizeElements(dat.list)

Arguments

dat.list

a list of tibbles

Value

the per-column quantile normalized list

Examples

basal <- wand.combined[wand.combined$condition == "basal",][,1:10]
il7 <- wand.combined[wand.combined$condition == "IL7",][,1:10]
QuantNormalizeElements(list(basal, il7))

[Package Sconify version 1.0.4 Index]