get.covg.thres,RnBDiffMeth-method {RnBeads}R Documentation

get.covg.thres-methods

Description

Gets the coverage threshold employed for obtaining statistics in the differential methylation tables

Usage

## S4 method for signature 'RnBDiffMeth'
get.covg.thres(object)

Arguments

object

RnBDiffMeth object

Value

integer coverage threshold

Author(s)

Fabian Mueller

Examples


library(RnBeads.hg19)
data(small.example.object)
logger.start(fname=NA)
dm <- rnb.execute.computeDiffMeth(rnb.set.example,pheno.cols=c("Sample_Group","Treatment"))
get.covg.thres(dm)


[Package RnBeads version 1.12.1 Index]