rnb.execute.tnt {RnBeads} | R Documentation |
export RnBSet to various output data formats
rnb.execute.tnt(rnb.set, out.dir, exp.bed = rnb.getOption("export.to.bed"), exp.trackhub = rnb.getOption("export.to.trackhub"), region.types = rnb.getOption("export.types"), ...)
rnb.set |
|
out.dir |
output directory. |
exp.bed |
A character vector indicating which data types should be exported to UCSC. Possible values in the vector are |
exp.trackhub |
file types which should be exported to a trackhub structure. |
region.types |
a character vector indicating region types to be exported |
... |
Arguments passed to |
a list containing information on the export
Fabian Mueller
library(RnBeads.hg19) data(small.example.object) logger.start(fname=NA) rnb.execute.tnt(rnb.set.example,tempdir())