greedycut.get.submatrix {RnBeads}R Documentation

greedycut.get.submatrix

Description

Filters a data matrix executing the given number of iterations of Greedycut.

Usage

greedycut.get.submatrix(mm, filter.info, it.num = nrow(filter.info) -
  as.integer(1))

Arguments

mm

Data matrix to be filtered.

filter.info

Information on the filtering iterations as a data.frame returned by greedycut.filter.matrix.

it.num

Number of iterations to execute. Defaults to all iterations.

Value

Data matrix containing subsets of the rows and columns of mm.

Author(s)

Yassen Assenov


[Package RnBeads version 1.12.1 Index]