createRNAinteract {RNAinteract} | R Documentation |
Creates a RNAinteract object given data matrices, annotation, query and template design.
createRNAinteract(data, well, plate, pdim, Reagents, Targets, TemplateDesign, QueryDesign, Transformation = NULL)
data |
An array with dimensions features x screens x channels. |
well |
A vector of length #features with well names. |
plate |
A vector of length #features with plate numbers. |
pdim |
A vector of length 2 with plate dimensions (e.g. pdim=c(12,8)). |
Reagents |
A data.frame describing the reagents. |
Targets |
A data.frame describing the targets. |
TemplateDesign |
A data.frame with the layout of the template plates. |
QueryDesign |
A data.frame with the layout of the query plates. |
Transformation |
A Transformation that is applied to the data. If NULL the data is log2 transformed. |
See vignette("RNAinteract") for an example how to create an RNAinteract object.
An object of class RNAinteract
.
Bernd Fischer
~put references to the literature/web site here ~
RNAinteract-package
, createRNAinteractFromFiles
, createCellHTSFromFiles