Alu.demo {REMP} | R Documentation |
A GRanges
dataset containing 500 Alu sequences that have CpGs profiled
by both Illumina 450k and EPIC array. The variables are as follows:
Alu.demo
A GRanges
object.
seqnames chromosome number
ranges hg19 genomic position
strand DNA strand
name Alu subfamily
score Smith Waterman (SW) alignment score
Index internal index
Scripts for generating this object are contained in the scripts
directory.
A GRanges object with 500 ranges and 3 metadata columns.
RepeatMasker database provided by package AnnotationHub
.