getTxdbFeatures {RCAS} | R Documentation |
This function takes as input a txdb object from GenomicFeatures library. Then extracts the coordinates of gene features such as promoters, introns, exons, 5'/3' UTRs, and whole transcripts.
getTxdbFeatures(txdb)
txdb |
A txdb object imported by GenomicFeatures::makeTxDb family of functions |
A list of GRanges objects
data(gff) txdb <- GenomicFeatures::makeTxDbFromGRanges(gff) txdbFeatures <- getTxdbFeatures(txdb)