queryRegions {RCAS}R Documentation

Sample BED file imported as a GRanges object

Description

This dataset contains a randomly selected sample of human LIN28A protein binding sites detected by HITS-CLIP analysis downloaded from DoRina database (LIN28A HITS-CLIP hESCs (Wilbert 2012)). The BED file is imported via the importBed function and a subset of the data is selected by randomly choosing 10000 regions.

Usage

queryRegions

Format

GRanges object with 10000 ranges and 2 metadata columns

Value

A GRanges object

Source

http://dorina.mdc-berlin.de/regulators


[Package RCAS version 1.6.0 Index]