PMID17290060 {MetaGxOvarian} | R Documentation |
The purpose of this study was to develop an integrated genomic-based approach to personalized treatment of patients with advanced-stage ovarian cancer. We have used gene expression profiles to identify patients likely to be resistant to primary platinum-based chemotherapy and also to identify alternate targeted therapeutic options for patients with de novo platinum-resistant disease.A gene expression model that predicts response to platinum-based therapy was developed using a training set of 83 advanced-stage serous ovarian cancers and tested on a 36-sample external validation set. In parallel, expression signatures that define the status of oncogenic signaling pathways were evaluated in 119 primary ovarian cancers and 12 ovarian cancer cell lines. In an effort to increase chemotherapy sensitivity, pathways shown to be activated in platinum-resistant cancers were subject to targeted therapy in ovarian cancer cell lines.Gene expression profiles identified patients with ovarian cancer likely to be resistant to primary platinum-based chemotherapy with greater than 80% accuracy. In patients with platinum-resistant disease, we identified expression signatures consistent with activation of Src and Rb/E2F pathways, components of which were successfully targeted to increase response in ovarian cancer cell lines.We have defined a strategy for treatment of patients with advanced-stage ovarian cancer that uses therapeutic stratification based on predictions of response to chemotherapy, coupled with prediction of oncogenic pathway deregulation, as a method to direct the use of targeted agents.
experimentData(eset): Experiment data Experimenter name: Dressman HK, Berchuck A, Chan G, Zhai J, Bild A, Sayer R, Cragun J, Clarke J, Whitaker RS, Li L, Gray J, Marks J, Ginsburg GS, Potti A, West M, Nevins JR, Lancaster JM.An integrated genomic-based approach to individualized treatment of patients with advanced-stage ovarian cancer. J Clin Oncol. 2007 Feb 10; 25(5):517-25. Laboratory: Dressman, Lancaster 2007 Contact information: Title: An integrated genomic-based approach to individualized treatment of patients with advanced-stage ovarian cancer. URL: PMIDs: 17290060 Abstract: A 223 word abstract is available. Use 'abstract' method. Information is available on: preprocessing notes: platform_title: [HG-U133A] Affymetrix Human Genome U133A Array platform_shorttitle: Affymetrix HG-U133A platform_summary: hgu133a platform_manufacturer: Affymetrix platform_distribution: commercial platform_accession: GPL96 warnings: This paper has been retracted. version: 2015-09-22 20:19:16 featureData(eset): An object of class 'AnnotatedDataFrame' featureNames: 1007_s_at 1053_at ... AFFX-HUMISGF3A/M97935_MB_at (20967 total) varLabels: probeset gene EntrezGene.ID best_probe varMetadata: labelDescription
assayData: 20967 features, 117 samples Platform type: Overall survival time-to-event summary (in years): Call: survfit(formula = Surv(time, cens) ~ -1) n events median 0.95LCL 0.95UCL 117.00 67.00 5.26 2.79 7.48 --------------------------- Available sample meta-data: --------------------------- alt_sample_name: 1024 1447 1451 1504 1526 1552 1578 1590 1615 1623 1 1 1 1 1 1 1 1 1 1 1665 1674 1675 1774 1784 1834 1846 1877 1913 1929 1 1 1 1 1 1 1 1 1 1 2046 2063 2064 2075 2198 2204 2324 2419 2422 2424 1 1 1 1 1 1 1 1 1 1 2465 2476 2479 2505 2542 2573 2673 2739 2802 2849 1 1 1 1 1 1 1 1 1 1 2895 2967 2981 2999 3018 3090 3102 3107 3142 860 1 1 1 1 1 1 1 1 1 1 872 922 D1805 D1837 D1859 D2098 D2208 D2332 D2342 D2358 1 1 1 1 1 1 1 1 1 1 D2421 D2432 D2433 D2480 D2557 D2559 D2560 D2572 D2575 D2576 1 1 1 1 1 1 1 1 1 1 D2581 D2603 D2611 D2629 D2640 D2648 D2668 D2689 D2691 D2700 1 1 1 1 1 1 1 1 1 1 D2726 D2727 D2733 D2738 D2749 D2776 D2792 M1054 M1055 M120 1 1 1 1 1 1 1 1 1 1 M1241 M1390 M1503 M1572 M17 M1891 M2070 M2097 M2184 (Other) 1 1 1 1 1 1 1 1 1 18 sample_type: tumor 117 histological_type: ser 117 primarysite: ov 117 summarygrade: high low NA's 57 57 3 summarystage: early late NA's 1 115 1 tumorstage: 2 3 4 NA's 1 98 17 1 grade: 1 2 3 4 NA's 4 53 56 1 3 days_to_death: Min. 1st Qu. Median Mean 3rd Qu. Max. 30 510 1020 1496 2220 5550 vital_status: deceased living 67 50 primary_therapy_outcome_success: completeresponse progressivedisease 85 32 debulking: optimal suboptimal 63 54 batch: 2002-09-20 2002-10-23 2002-11-12 2002-12-16 2002-12-21 2003-01-03 2003-05-30 10 8 9 1 3 11 10 2004-03-09 2004-03-16 2004-04-20 2004-05-18 2004-05-21 2004-05-27 2004-06-22 16 6 5 15 7 7 1 2004-06-23 8 uncurated_author_metadata: OVC.TumorID: 1024///Survival: 13///X0...alive...1...dead: 1///Assigned.Stage: 4///GRADE: 3///Debulk: S///CA125.POST: 12///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1447///Survival: 75///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 8.6///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1451///Survival: 132///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 16///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1504///Survival: 108///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 4///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1526///Survival: 74///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 5.1///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1552///Survival: 33///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 9.9///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1578///Survival: 33///X0...alive...1...dead: 1///Assigned.Stage: 4///GRADE: 2///Debulk: O///CA125.POST: 8.7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1590///Survival: 148///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1615///Survival: 13///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 875///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1623///Survival: 147///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 1///Debulk: O///CA125.POST: 4///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1665///Survival: 15///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 500///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1674///Survival: 18///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 15///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1675///Survival: 34///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 14.4///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1774///Survival: 22///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 33.3///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1784///Survival: 78///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 32///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1834///Survival: 118///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 17///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1846///Survival: 142///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 9///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1877///Survival: 119///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1913///Survival: 32///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: <20///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 1929///Survival: 134///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 4///Debulk: S///CA125.POST: 7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2046///Survival: 127///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 6///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2063///Survival: 16///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 26.8///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2064///Survival: 27///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: ELEVATED///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2075///Survival: 87///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 8///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2198///Survival: 91///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2204///Survival: 118///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2324///Survival: 98///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2419///Survival: 107///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 10///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2422///Survival: 20///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 8///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2424///Survival: 16///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 1117///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2465///Survival: 17///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 4928///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2476///Survival: 86///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 56.1///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2479///Survival: 95///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 16.5///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2505///Survival: 95///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 12///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2542///Survival: 36///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 8///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2573///Survival: 7///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 641.3///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2673///Survival: 74///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 11.5///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2739///Survival: 67///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 10///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2802///Survival: 24///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 402///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2849///Survival: 23///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 37.6///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2895///Survival: 9///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 41.6///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2967///Survival: 22///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 26///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2981///Survival: 6///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 30.6///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 2999///Survival: 16///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 2291///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 3018///Survival: 16///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 6.2///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 3090///Survival: 16///X0...alive...1...dead: 1///Assigned.Stage: 4///GRADE: 2///Debulk: O///CA125.POST: 10.8///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 3102///Survival: 10///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: ?///Debulk: S///CA125.POST: 127.3///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 3107///Survival: 31///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 11.2///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 3142///Survival: 18///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 52///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 860///Survival: 17///X0...alive...1...dead: 1///Assigned.Stage: 4///GRADE: 3///Debulk: O///CA125.POST: 133///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 872///Survival: 185///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 3.1///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: 922///Survival: 183///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 9///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D1805///Survival: 9///X0...alive...1...dead: 1///Assigned.Stage: 4///GRADE: 2///Debulk: S///CA125.POST: 331///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D1837///Survival: 83///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 11.3///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D1859///Survival: 110///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 15///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2098///Survival: 42///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: NA///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2208///Survival: 2///X0...alive...1...dead: 0///Assigned.Stage: 4///GRADE: 3///Debulk: S///CA125.POST: 808.6///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2332///Survival: 27///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 11///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2342///Survival: 20///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 473///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2358///Survival: 9///X0...alive...1...dead: 1///Assigned.Stage: 4///GRADE: 2///Debulk: O///CA125.POST: 29///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2421///Survival: 12///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 35///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2432///Survival: 34///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 9///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2433///Survival: 49///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 12.7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2480///Survival: 34///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 29.6///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2557///Survival: 62///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 1920///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2559///Survival: 5///X0...alive...1...dead: 1///Assigned.Stage: 4///GRADE: 3///Debulk: O///CA125.POST: 9.6///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2560///Survival: 91///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 10.5///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2572///Survival: 37///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 24///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2575///Survival: 33///X0...alive...1...dead: 1///Assigned.Stage: 4///GRADE: 2///Debulk: O///CA125.POST: 13.7///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2576///Survival: 17///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 43.1///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2581///Survival: 63///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 1///Debulk: O///CA125.POST: 48///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2603///Survival: 42///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3///Debulk: O///CA125.POST: 15.2///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2611///Survival: 2///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 134///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2629///Survival: 36///X0...alive...1...dead: 0///Assigned.Stage: 4///GRADE: 2///Debulk: S///CA125.POST: 56///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2640///Survival: 1///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 158.3///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2648///Survival: 35///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 58.7///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2668///Survival: 40///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: ///Debulk: S///CA125.POST: ///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2689///Survival: 45///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 13.5///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2691///Survival: 63///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 16.5///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2700///Survival: 74///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 13.9///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2726///Survival: 71///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: S///CA125.POST: 6.6///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2727///Survival: 53///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 44///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2733///Survival: 55///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 12.1///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2738///Survival: 68///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 37.9///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2749///Survival: 24///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2///Debulk: O///CA125.POST: 16.3///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2776///Survival: 10///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 41.2///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: D2792///Survival: 16///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3///Debulk: S///CA125.POST: 32.6///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M1054///Survival: 101///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: UNK///Debulk: Optimal///CA125.POST: 46///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M1055///Survival: 13///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3 ///Debulk: Optimal///CA125.POST: UNK///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M120///Survival: 35///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3 ///Debulk: Optimal///CA125.POST: 2///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M1241///Survival: 95///X0...alive...1...dead: 0///Assigned.Stage: 4///GRADE: 3 ///Debulk: Suboptimal///CA125.POST: 10///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M1390///Survival: 46///X0...alive...1...dead: 0///Assigned.Stage: 4///GRADE: 3///Debulk: O///CA125.POST: UNK///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M1503///Survival: 53///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 2/3///Debulk: Optimal///CA125.POST: 19///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M1572///Survival: 22///X0...alive...1...dead: 1///Assigned.Stage: 3///GRADE: 3 ///Debulk: Optimal///CA125.POST: 49///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M17///Survival: 17///X0...alive...1...dead: 0///Assigned.Stage: 4///GRADE: 2 ///Debulk: Suboptimal///CA125.POST: 4700///response.0.NR..1.CR.: 0///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M1891///Survival: 12///X0...alive...1...dead: 0///Assigned.Stage: 4///GRADE: 1 ///Debulk: Suboptimal (10/3/97)///CA125.POST: 17///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M2070///Survival: 65///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3 ///Debulk: Suboptimal///CA125.POST: 22///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M2097///Survival: 58///X0...alive...1...dead: 0///Assigned.Stage: 2///GRADE: 2/3///Debulk: Optimal///CA125.POST: ///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 OVC.TumorID: M2184///Survival: 34///X0...alive...1...dead: 0///Assigned.Stage: 3///GRADE: 3 ///Debulk: Optimal///CA125.POST: 10///response.0.NR..1.CR.: 1///X: NA///X.1: NA///X.2: NA 1 (Other) 18
An expression set