msgfParChargeRange-class {MSGFplus} | R Documentation |
This class defines a charge range and provides methods to get correct system call parameters.
## S4 method for signature 'msgfParChargeRange' show(object) ## S4 method for signature 'msgfParChargeRange' length(x) ## S4 method for signature 'msgfParChargeRange' getMSGFpar(object) msgfParChargeRange(value)
object |
An msgfParChargeRange object |
x |
An msgfParChargeRange object |
value |
A numeric vector of length 2. The first element must be smaller than the last |
For length() An integer.
For getMSGFpar() A string.
For msgfParChargeRange() An msgfParChargeRange object.
show
: Short summary of msgfParChargeRange object
length
: Report the length of an msgfParChargeRange
object
getMSGFpar
: Get system
compliant
function call
value
A numeric vector of length 2 describing the upper and lower bounds of the charge range
Other msgfParClasses: msgfPar-class
,
msgfParEnzyme-class
,
msgfParFragmentation-class
,
msgfParInstrument-class
,
msgfParIsotopeError-class
,
msgfParLengthRange-class
,
msgfParMatches-class
,
msgfParModification-class
,
msgfParModificationList-class
,
msgfParNtt-class
,
msgfParProtocol-class
,
msgfParTda-class
,
msgfParTolerance-class
,
msgfPar
charges <- msgfParChargeRange(c(2, 5))