ReadRRA {MAGeCKFlute} | R Documentation |
Read pvalue of gene selection from file or data frame
ReadRRA(gene_summary, organism = "hsa")
gene_summary |
A file path or a data frame, which has three columns named 'id', 'neg.fdr' and 'pos.fdr'. |
organism |
Character, KEGG species code, or the common species name, used to determine the gene annotation package. For all potential values check: data(bods); bods. Default org="hsa", and can also be "human" (case insensitive). |
A data frame including four columns, named "Official", "neg.fdr", "pos.fdr" and "ENTREZID".
Wubing Zhang
data(RRA_Data) dd.rra = ReadRRA(RRA_Data, organism="hsa") head(dd.rra)