JASPAR2018-class {JASPAR2018} | R Documentation |
The JASPAR2018 object class is a thin class for storing the path of JASPAR2018 style SQLite file.
db
:Object of class "character"
:
a character string of the path of SQLite file.
Ge Tan
library(TFBSTools) opts <- list() opts[["species"]] <- 9606 opts[["type"]] <- "SELEX" opts[["all_versions"]] <- TRUE PFMatrixList <- getMatrixSet(JASPAR2018, opts) opts2 <- list() opts2[["type"]] <- "SELEX" PFMatrixList2 <- getMatrixSet(JASPAR2018, opts2)