DataFilter$do.apply {IdMappingAnalysis} | R Documentation |
Filter experiment using constraints.
The function applyies the constraint filter to the experiment data.frame
, by rows or columns,
replacing the content of each row or column with constraint filter output. In most cases, if the
given row or column passes the constraint check, it is left intact and replaced by NA
's otherwise.
One of the purposes of this function is to perform the quality control of experiment data and filter out
series which do not pass the QC by applying the removeNASeries method as the last step.
## Static method (use this): ## DataFilter$do.apply(experimentSet, byRows=TRUE, filterFun=NULL, filtParams=NULL, verbose=FALSE, ...) ## Don't use the below: ## S3 method for class 'DataFilter' do.apply(static, experimentSet, byRows=TRUE, filterFun=NULL, filtParams=NULL, verbose=FALSE, ...)
experimentSet |
|
byRows |
|
filterFun |
The filtering function applyied to the experiment set, typically the constraint filter. |
filtParams |
Filtering function parameters. |
verbose |
|
... |
Not used |
The data.frame
with data filtered by filterFun.
Alex Lisovich, Roger Day
For more information see DataFilter
.