getExperimentSet.CorrData {IdMappingAnalysis} | R Documentation |
Get experiment set data frame for a given modality.
## S3 method for class 'CorrData' getExperimentSet(this, modality, as=c("data.frame", "ExpressionSet"), IDs=NULL, verbose=FALSE, ...)
modality |
Experiment modality for which data to be retrieved, i.e. 'Uniprot', 'Affy' etc. |
as |
|
IDs |
Optional character vector of ID subset for which data to be retrieved,
or |
verbose |
|
... |
Not used |
Depending on 'as' argument, either EspressionSet or data.frame
containing experiment data for a given modality.
Alex Lisovich, Roger Day
For more information see CorrData
.
#retrieve msms ('Uniprot') experiment data as a data frame expSetDF<-examples$corrData$getExperimentSet(modality="Uniprot",as="data.frame"); expSetDF[1:10,1:5]; #retrieve mrns ('Affy') experiment data as an ExpressionSet expSet<-examples$corrData$getExperimentSet(modality="Affy",as="ExpressionSet"); print(expSet); expSetDF<-t(as(expSet,"data.frame")); expSetDF[1:10,1:5];