INSPEcT_diffsteady-class {INSPEcT} | R Documentation |
INSPEcT_diffsteady is a class able to store the results of the comparisons between two steady states.
An object of class INSPEcT_diffsteady is created with the method "compareSteady" applied on
two "INSPEcT" objects (see compareSteady
).
synthesis(object) processing(object) degradation(object) ## S4 method for signature 'INSPEcT_diffsteady' show(object) ## S4 method for signature 'INSPEcT_diffsteady' synthesis(object) ## S4 method for signature 'INSPEcT_diffsteady' processing(object) ## S4 method for signature 'INSPEcT_diffsteady' degradation(object)
object |
An object of class INSPEcT_model |
Methods associated to the class INSPEcT_diffsteady are:
synthesis: Accessor to the synthesis rates and their comparisons.
degradation: Accessor to the degradation rates and their comparisons.
processing: Accessor to the processing rates and their comparisons.
plotMA: visualization fuction for rates comparisons, see plotMA
Method show for objects of class INSPEcT_model returns the number of the genes that have been modeled
synthesis
A data.frame which contains both input data and comparisons results regarding synthesis rates
degradation
A data.frame which contains both input data and comparisons results regarding degradation rates
processing
A data.frame which contains both input data and comparisons results regarding processing rates
data('simData3rep', package='INSPEcT') data('simData3rep_2', package='INSPEcT') diffrates <- compareSteady(simData3rep, simData3rep_2) head(synthesis(diffrates)) head(processing(diffrates)) head(degradation(diffrates))