GenoGAM-methods {GenoGAM} | R Documentation |
The different accessor functions for the GenoGAM object
The 'positions' slot holds the positions of the fit in GPos format
The 'design' slot holds the formula of the fit
The 'fits' slot contains the fitted values of the model
The 'experimentDesign' slot contains the experimental design of the model as specified in the config file
## S4 method for signature 'GenoGAM' rowRanges(x) ## S4 method for signature 'GenoGAM' design(object) getFits(x) ## S4 method for signature 'GenoGAM' getFits(x) ## S4 method for signature 'GenoGAM' colData(x)
x, object |
A GenoGAM object. |
The respective slot
Georg Stricker georg.stricker@in.tum.de
gg <- makeTestGenoGAM() ranges <- rowRanges(gg) gg <- makeTestGenoGAM() des <- design(gg) gg <- makeTestGenoGAM() fits <- getFits(gg) gg <- makeTestGenoGAM() exdesign <- colData(gg)