getChunkIndex {GenoGAM}R Documentation

Compute the index for chunks instead tiles

Description

The chunk index holds the Granges object that splits the entire dataset in chunk, that is non-overlapping intervals.

Usage

getChunkIndex(object, ...)

## S4 method for signature 'GenomicTiles'
getChunkIndex(object, id = NULL)

Arguments

object

A /codeGenomicTiles object.

...

Additional arguments

id

A vector if tile ids. By default the complete index is returned.

Value

A /codeGRanges object representing the index

Author(s)

Georg Stricker georg.stricker@in.tum.de

Examples

gt <- makeTestGenomicTiles()
getChunkIndex(gt)

[Package GenoGAM version 1.8.0 Index]