get.oncotator.anno {CVE} | R Documentation |
The get.oncotator.anno retrieves annotation from the Oncotator database.
get.oncotator.anno(x)
x |
A matrix containing the columns chromosome, start, end, reference_allele and observed_allele. |
exCase <- data.frame(chr = rep(10, 3), start = c("100894110", "100985376", "101137905"), end = c("100894110", "100985376", "101137905"), ref_allele = c("T", "C", "G"), obs_allele = c("G", "A", "A")) get.oncotator.anno(exCase)