getgc {CODEX} | R Documentation |
Computes GC content for each exon. Will be later used in QC procedure and normalization.
getgc(chr, ref)
chr |
Chromosome returned from |
ref |
IRanges object returned from |
Vector of GC content for each exon.
Yuchao Jiang yuchaoj@wharton.upenn.edu
Team TBD. BSgenome.Hsapiens.UCSC.hg19: Full genome sequences for Homo sapiens (UCSC version hg19). R package version 1.3.99.
ref <- IRanges(st = 51207851, end = 51207982) gc <- getgc(chr = 22, ref)