matchGenes {BioQC} | R Documentation |
Match genes in a list-like object to a vector of genesymbols
matchGenes(list, object, ...) ## S4 method for signature 'GmtList,character' matchGenes(list, object) ## S4 method for signature 'GmtList,matrix' matchGenes(list, object) ## S4 method for signature 'GmtList,eSet' matchGenes(list, object, col = "GeneSymbol") ## S4 method for signature 'character,character' matchGenes(list, object) ## S4 method for signature 'character,matrix' matchGenes(list, object) ## S4 method for signature 'character,eSet' matchGenes(list, object) ## S4 method for signature 'SignedGenesets,character' matchGenes(list, object) ## S4 method for signature 'SignedGenesets,matrix' matchGenes(list, object) ## S4 method for signature 'SignedGenesets,eSet' matchGenes(list, object, col = "GeneSymbol")
list |
A GmtList, list, character or SignedGenesets object |
object |
Gene symbols to be matched; they can come from a vector of character strings, or
a column in the fData of an |
... |
additional arguments like |
col |
Column name of |