old_plot_cluster_prof {BPRMeth} | R Documentation |
(DEPRECATED) plot_cluster_prof
creates a plot of cluster
methylation profiles, where each colour denotes a different cluster.
old_plot_cluster_prof(bpr_cluster_obj, main_lab = "Clustered methylation profiles")
bpr_cluster_obj |
The output of the |
main_lab |
The title of the plot |
The figure to be plotted in the device.
C.A.Kapourani C.A.Kapourani@ed.ac.uk
old_plot_fitted_profiles
,
old_boxplot_cluster_gex
# Cluster methylation profiles using 4 RBFs obs <- meth_data basis <- create_rbf_object(M = 4) res <- bpr_cluster_wrap(x = obs, K = 3, em_max_iter = 2, opt_itnmax = 3, init_opt_itnmax = 2, is_parallel = FALSE) # Create the plot old_plot_cluster_prof(bpr_cluster_obj = res)