R/lkcomb.R
DRProfSet.Rd
DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset
getDrugs extracts drug list
DRProfSet manages all data from a given cell line from a pharmacogenomics source
getDrugs(x)
DRProfSet(cell_line = "MCF7", dataset = "CCLE")
# S4 method for DRProfSet,missing
plot(x, y, ...)
instance of DRProfSet
character(1) cell line name, entries in cell_lines_v1
character(1) resource name, entries in datasets_v1
for plot: not used
not used
getDrugs: character vector
instance of DRProfSet
if (interactive()) trs = DRTraceSet() else trs = iriCCLE()
ps = traces(trs)[[1]]
ps
#> DRProfSet with 1 dose-response profiles for cell line SK-ES-1
#> dataset: CCLE
getDrugs(ps)
#> [1] "Irinotecan"
if (interactive()) DRProfSet()