Fcs filename and gate name stored in 'custom_info' element are beyong the scope of the gatingML standard and thus not covered by the default 'read.gatingML'.

parse.gateInfo(file, ...)

Arguments

file

xml file path

...

additional arguments passed to the handlers of 'xmlTreeParse'

Value

a data.frame that contains three columns: id (gateId), name (gate name), fcs (fcs_file_filename).