Package: GenomicTuples
Type: Package
Title: Representation and Manipulation of Genomic Tuples
Version: 1.43.0
Date: 2024-11-13
Encoding: UTF-8
Authors@R: c(person("Peter", "Hickey", role = c("aut", "cre"),
    email = "peter.hickey@gmail.com"),
    person("Marcin", "Cieslik", role = "ctb",
    email = "marcin.cieslik@gmail.com"),
    person("Hervé", "Pagès", role = "ctb"))
Description: GenomicTuples defines general purpose containers for storing
    genomic tuples. It aims to provide functionality for tuples of genomic
    co-ordinates that are analogous to those available for genomic ranges in
    the GenomicRanges Bioconductor package.
URL: www.github.com/PeteHaitch/GenomicTuples
BugReports: https://github.com/PeteHaitch/GenomicTuples/issues
biocViews: Infrastructure, DataRepresentation, Sequencing
VignetteBuilder: knitr
Depends: R (>= 4.0), GenomicRanges (>= 1.37.4), GenomeInfoDb (>=
        1.15.2), S4Vectors (>= 0.17.25)
Imports: methods, BiocGenerics (>= 0.21.2), Rcpp (>= 0.11.2), IRanges
        (>= 2.19.13), data.table, stats4, stats, utils
Suggests: testthat, knitr, BiocStyle, rmarkdown, covr,
        GenomicAlignments, Biostrings
LinkingTo: Rcpp
License: Artistic-2.0
Collate: 'AllGenerics.R' 'AllUtilities.R' 'GTuples-class.R'
        'GTuples-comparison.R' 'GTuplesList-class.R' 'GenomicTuples.R'
        'RcppExports.R' 'coverage-methods.R' 'findOverlaps-methods.R'
        'inter-tuple-methods.R' 'intra-tuple-methods.R'
        'nearest-methods.R' 'setops-methods.R' 'tile-methods.R' 'zzz.R'
RoxygenNote: 7.2.3
git_url: https://git.bioconductor.org/packages/GenomicTuples
git_branch: devel
git_last_commit: b06909f
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-06-04
NeedsCompilation: yes
Packaged: 2025-06-04 23:19:26 UTC; biocbuild
Author: Peter Hickey [aut, cre],
  Marcin Cieslik [ctb],
  Hervé Pagès [ctb]
Maintainer: Peter Hickey <peter.hickey@gmail.com>
Built: R 4.5.0; x86_64-w64-mingw32; 2025-06-05 13:04:36 UTC; windows
Archs: x64
