# RNASeqR: an R package for automated two-group RNA-Seq analysis workflow

## Documentation for package ‘RNASeqR’ version 1.4.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

All_Steps_Interface | RNASeqEnvironmentSet
All_Steps_Interface_CMD | All_Steps_Interface_CMD
CheckToolAll | CheckToolAll
RNASeqDifferentialAnalysis | RNASeqDifferentialAnalysis
RNASeqDifferentialAnalysis_CMD | RNASeqDifferentialAnalysis_CMD
RNASeqEnvironmentSet | RNASeqEnvironmentSet
RNASeqEnvironmentSet_CMD | RNASeqEnvironmentSet_CMD
RNASeqGoKegg | RNASeqGoKegg
RNASeqGoKegg_CMD | RNASeqGoKegg_CMD
RNASeqQualityAssessment | RNASeqQualityAssessment
RNASeqQualityAssessment_CMD | RNASeqQualityAssessment_CMD
RNASeqR | RNASeqR-package
RNASeqReadProcess | RNASeqReadProcess
RNASeqReadProcess_CMD | RNASeqReadProcess_CMD
RNASeqRParam | RNASeqRParam
RNASeqRParam-class | RNASeqR
RNASeqRParam-constructor | RNASeqRParam
RNASeqRParam_Bam | RNASeqR_Bam
RNASeqRParam_Bam-class | RNASeqRParam_Bam
RNASeqRParam_Bam-constructor | RNASeqR_Bam
RNASeqRParam_Sam | RNASeqR_Sam
RNASeqRParam_Sam-class | RNASeqRParam_Sam
RNASeqRParam_Sam-constructor | RNASeqR_Sam
Update_Fastq_gz | Update_Fastq_gz
yeast | Toy RNASeqRParam object