Last updated on 2025-07-08 21:48:28 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.67 | 236.91 | 250.58 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.25 | 203.87 | 215.12 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.93 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 163.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 184.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 162.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.039, elapsed: 2.058 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.966, system: 0.099, elapsed: 13.667 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.408 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.752, system: 0.195, elapsed: 6.845 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.216 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.133, system: 0.374, elapsed: 24.080 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.482, system: 0.035, elapsed: 2.436 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.947, system: 0.077, elapsed: 14.302 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.358 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.170, elapsed: 5.992 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.223 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.979, system: 0.317, elapsed: 24.206 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.483, system: 0.024, elapsed: 1.876 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.965, system: 0.069, elapsed: 13.061 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.624, system: 0.162, elapsed: 4.921 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.256 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.141, system: 0.213, elapsed: 1.155 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.187, system: 0.502, elapsed: 22.381 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.463, system: 0.030, elapsed: 2.165 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.970, system: 0.134, elapsed: 14.623 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.015, elapsed: 0.337 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.769, system: 0.233, elapsed: 6.179 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.006, elapsed: 0.257 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.227, system: 0.512, elapsed: 14.173 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.425, system: 0.968, elapsed: 38.762 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/108s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.041, elapsed: 1.666 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.655, system: 0.062, elapsed: 10.007 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.345 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.660, system: 0.191, elapsed: 6.611 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.249 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.699, system: 0.333, elapsed: 19.667 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.549, system: 0.039, elapsed: 2.871 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.979, system: 0.079, elapsed: 14.476 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.336 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.495, system: 0.168, elapsed: 5.492 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.005, elapsed: 0.231 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.886, system: 0.324, elapsed: 24.298 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.531, system: 0.027, elapsed: 2.471 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.920, system: 0.066, elapsed: 13.616 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.010, elapsed: 0.315 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.512, system: 0.157, elapsed: 5.265 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.222 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.031, system: 0.242, elapsed: 0.852 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.951, system: 0.528, elapsed: 23.679 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.446, system: 0.030, elapsed: 2.368 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.882, system: 0.076, elapsed: 12.546 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.246 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.536, system: 0.179, elapsed: 4.422 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.209 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.050, system: 0.509, elapsed: 13.331 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.891, system: 0.841, elapsed: 34.276 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64