Last updated on 2025-09-04 17:49:15 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.63 | 251.90 | 265.53 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.12 | 231.15 | 241.27 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 354.05 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 179.00 | 198.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.82 | 240.60 | 256.42 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.01 | 254.59 | 269.60 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 195.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 184.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 237.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/138s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.047, elapsed: 2.564 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.946, system: 0.116, elapsed: 15.081 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.014, elapsed: 0.328 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.758, system: 0.192, elapsed: 6.884 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.272 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.127, system: 0.394, elapsed: 26.106 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.425, system: 0.033, elapsed: 2.765 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.886, system: 0.060, elapsed: 19.714 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.012, elapsed: 0.472 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.658, system: 0.149, elapsed: 9.999 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.362 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.841, system: 0.275, elapsed: 34.506 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.030, elapsed: 3.834 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.974, system: 0.066, elapsed: 14.918 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.013, elapsed: 0.360 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.711, system: 0.173, elapsed: 5.557 seconds]
Computing values for grid cells...
... done. [user: 0.152, system: 0.003, elapsed: 0.213 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.106, system: 0.204, elapsed: 1.061 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.262, system: 0.511, elapsed: 27.146 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.464, system: 0.033, elapsed: 2.576 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.880, system: 0.097, elapsed: 14.409 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.758, system: 0.191, elapsed: 7.073 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.275 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.271, system: 0.479, elapsed: 17.532 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.371, system: 0.840, elapsed: 43.220 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.554, system: 0.048, elapsed: 3.317 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.000, system: 0.109, elapsed: 14.647 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.523, system: 0.189, elapsed: 5.480 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.006, elapsed: 0.280 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.940, system: 0.386, elapsed: 24.900 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.592, system: 0.045, elapsed: 2.604 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.994, system: 0.094, elapsed: 11.359 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.011, elapsed: 0.190 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.657, system: 0.178, elapsed: 6.219 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.300 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.114, system: 0.356, elapsed: 21.484 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.035, elapsed: 2.792 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.966, system: 0.062, elapsed: 13.952 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.554, system: 0.177, elapsed: 5.614 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.013, elapsed: 0.341 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.061, system: 0.254, elapsed: 1.160 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.124, system: 0.586, elapsed: 25.200 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.036, elapsed: 2.315 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.949, system: 0.070, elapsed: 13.057 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.016, elapsed: 0.391 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.609, system: 0.213, elapsed: 6.641 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.006, elapsed: 0.287 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.025, system: 0.620, elapsed: 17.701 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.080, system: 0.998, elapsed: 41.538 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64