Last updated on 2025-10-25 17:48:42 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.13 | 252.16 | 265.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.03 | 225.22 | 235.25 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 58.00 | 285.70 | 343.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.00 | 274.06 | 289.06 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.69 | 272.97 | 288.66 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 27.00 | 381.00 | 408.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 22.00 | 240.00 | 262.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/292s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.773, system: 0.140, elapsed: 6.206 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.656, system: 0.476, elapsed: 34.924 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.031, elapsed: 1.078 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.239, system: 0.414, elapsed: 13.527 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.011, elapsed: 0.417 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.732, system: 1.420, elapsed: 60.068 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.754, system: 0.125, elapsed: 6.196 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.792, system: 0.565, elapsed: 28.361 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.036, elapsed: 0.481 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.370, system: 0.634, elapsed: 12.292 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.014, elapsed: 0.611 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.981, system: 1.814, elapsed: 51.311 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.908, system: 0.134, elapsed: 10.077 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.587, system: 0.365, elapsed: 47.331 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.032, elapsed: 0.852 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.289, system: 0.496, elapsed: 15.502 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.013, elapsed: 0.536 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.350, system: 0.355, elapsed: 2.782 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.346, system: 1.787, elapsed: 81.559 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.062, elapsed: 3.583 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.405, system: 0.247, elapsed: 21.505 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.022, elapsed: 0.431 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.248, system: 0.471, elapsed: 14.103 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.021, elapsed: 0.531 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.464, system: 1.376, elapsed: 39.695 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.829, system: 2.405, elapsed: 82.579 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/164s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.072, elapsed: 2.575 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.411, system: 0.160, elapsed: 11.620 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.176, system: 0.022, elapsed: 0.230 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.354, system: 0.257, elapsed: 5.566 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.011, elapsed: 0.351 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.300, system: 0.562, elapsed: 22.061 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.852, system: 0.131, elapsed: 4.865 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.291, system: 0.319, elapsed: 14.688 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.175, system: 0.015, elapsed: 0.200 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.429, system: 0.213, elapsed: 4.149 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.012, elapsed: 0.241 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.532, system: 0.763, elapsed: 25.316 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.571, system: 0.073, elapsed: 2.302 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.715, system: 0.190, elapsed: 11.316 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.031, elapsed: 0.529 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.987, system: 0.425, elapsed: 8.491 seconds]
Computing values for grid cells...
... done. [user: 0.203, system: 0.041, elapsed: 0.632 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.251, system: 0.428, elapsed: 2.327 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.675, system: 1.275, elapsed: 27.552 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.716, system: 0.099, elapsed: 3.717 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.463, system: 0.346, elapsed: 20.223 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.021, elapsed: 0.458 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.085, system: 0.445, elapsed: 14.676 seconds]
Computing values for grid cells...
... done. [user: 0.204, system: 0.029, elapsed: 1.231 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.349, system: 1.263, elapsed: 35.851 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.766, system: 2.551, elapsed: 79.355 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64