Package: MicrobiomeStat
Type: Package
Title: Statistical Methods for Microbiome Compositional Data
Version: 1.2
Date: 2024-03-13
Authors@R: c(
              person("Xianyang", "Zhang", role = "aut", email = "zhangxiany@stat.tamu.edu"),
              person("Jun", "Chen", role = c("aut", "cre"),
                     email = "chen.jun2@mayo.edu"),
              person("Huijuan", "Zhou", role = "ctb"))
Author: Xianyang Zhang [aut],
  Jun Chen [aut, cre],
  Huijuan Zhou [ctb]
Maintainer: Jun Chen <chen.jun2@mayo.edu>
Description: A suite of methods for powerful and robust microbiome data analysis addressing zero-inflation, phylogenetic structure and compositional effects (Zhou et al. (2022)<doi:10.1186/s13059-022-02655-5>).  The methods can be applied to the analysis of other (high-dimensional) compositional data arising from sequencing experiments.
Depends: R (>= 3.5.0)
Imports: ggplot2, matrixStats, parallel, stats, utils, Matrix, statmod,
        MASS, ggrepel, lmerTest, foreach, modeest
NeedsCompilation: yes
License: GPL-3
Encoding: UTF-8
Packaged: 2024-04-01 22:00:40 UTC; m123485
Repository: CRAN
Date/Publication: 2024-04-01 22:30:02 UTC
Built: R 4.4.3; ; 2025-10-21 13:42:22 UTC; windows
