Apoptosis and MAP-Kinase example data {facsDorit}R Documentation

FACS data for cell-based apoptosis assay

Description

Set of FCS 3.0 files containing FACS data for each well of a 96 well microtitre plate

Format

map and apoptosis are directories, each containing 96 FCS 3.0 files derived from a FACS experiment to characterize effectors of the MAP-Kinase and apoptotic pathways, respectively. The files may be imported using function readFCS (for single files) or function readCytoSet (for all files in the directory).

Source

Mamatha Sauermann (apoptosis), Meher Majety (MAP-Kinase), both at DKFZ Heidelberg

References

See Also

readFCS, readCytoSet

Examples

apo <- readFCS(system.file("extdata", "apoptosis",
           "test2933T3.A01", package="facsDorit"))
apo
exprs(apo[1:3,])
description(apo)[3:6]

map <- readFCS(system.file("extdata", "map",
           "060304MAPK controls.A01", package="facsDorit"))
map
exprs(map[1:3,])
description(map)[3:6]

[Package facsDorit version 1.1.1 Index]